UMAP projections show macrophage subsets
Heatmaps show mean expression of gene lists described by Culemann et al. Replicates are shown separately for each macrophage subset.
Heatmap shows top upregulated genes associated with inflammatory disease for CHIKV vs mock-infected macrophages
UMAP projections show examples of upregulated genes for mock vs CHIKV-infected macrophages
Top genes upregulated in CHIKV-infected mice are shown below for each macrophage subset.